Pathomx logo

Pathomx

Constructs rapid, reproducible analysis for experimental data using workflows and custom inline scripting.

Made by Martin Fitzpatrick

  • omics

  • proteomics

  • metabolomics

  • scientific

  • science

  • transcriptomics

  • python-app

  • genomics

  • Research

What is Pathomx?

Pathomx is a versatile workflow-based platform that enables the analysis and visualization of diverse experimental data. Initially designed for metabolomic data analysis, the software has been expanded to support a wide range of scientific and non-scientific applications. Pathomx blends the strengths of workflow-driven and script-based approaches, allowing users to construct rapid and reproducible analysis pipelines while maintaining the flexibility to perform custom scripting as needed. The platform's workflow capabilities enable users to dynamically rearrange analysis steps, test different approaches, and save workflows to track the evolution of their analytical methods. These saved workflows can be shared with others, facilitating the instant reproduction of results and methodologies. Pathomx's export functionality allows users to generate publication-ready, high-resolution images in common file formats

Highlights

  • Workflow-based analysis with support for custom scripting
  • Dynamic workflow rearrangement and versioning to test different approaches
  • Workflow sharing for instant reproduction of results and methods
  • Export of publication-ready, high-resolution images

Platforms

  • Windows
  • Mac

Languages

  • English

Social

Features

    • Bioinformatics